miRBase entry: ptr-mir-1249

Stem-loop ptr-mir-1249


Accession
MI0008455
Description
Pan troglodytes ptr-mir-1249 precursor miRNA
Gene family
MIPF0000667; mir-1249


Sequence

gggaggagggaggagaugggccaaguucccucuggcuggaACGCCCUUCCCCCCCUUCUUCAccu
.(((((((((.((.((.((((...(((((........))))))))).)).)))))))))))....

Structure
---g         a  a  u    caa     cuc 
    ggaggaggg gg ga gggc   guucc   u
    ||||||||| || || ||||   |||||    
    CUUCUUCCC CC CU CCCG   CAagg   g
uccA         -  C  U    ---     ucg 


Annotation confidence Not enough data
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Genome context
chr22: 31976015-31976079 [-]

Database links

Mature ptr-miR-1249

Accession MIMAT0007975
Description Pan troglodytes ptr-miR-1249 mature miRNA
Sequence 41 - ACGCCCUUCCCCCCCUUCUUCA - 62
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70