miRBase entry: ptr-mir-1256

Stem-loop ptr-mir-1256


Accession
MI0008461
Description
Pan troglodytes ptr-mir-1256 precursor miRNA
Gene family
MIPF0000594; mir-1256


Sequence

agucagccuguugaagcuuugaagcuuugaugccAGGCAUUGACUUCUCACUAGCUaugaaaguccuagcuaaagagaagucaaugcaugacaucuuguuucaauagauggcuguuuc
(((((..((((((((((...........((((.((.(((((((((((((..((((((.((...)).))))))..))))))))))))).)).))))..)))))))))).))))).....

Structure
-----     gc          uuugaagcuuu    c  G             AC      u  a 
     aguca  cuguugaagc           gaug cA GCAUUGACUUCUC  UAGCUa ga  
     |||||  ||||||||||           |||| || |||||||||||||  |||||| || a
     ucggu  gauaacuuug           cuac gu cguaacugaagag  aucgau cu  
cuuug     -a          ---------uu    a  a             aa      c  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr1: 20019889-20020006 [-]

Database links

Mature ptr-miR-1256

Accession MIMAT0007981
Description Pan troglodytes ptr-miR-1256 mature miRNA
Sequence 35 - AGGCAUUGACUUCUCACUAGCU - 56
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70