miRBase entry: ptr-mir-1262

Stem-loop ptr-mir-1262


Accession
MI0008466
Description
Pan troglodytes ptr-mir-1262 precursor miRNA
Gene family
MIPF0000595; mir-1262


Sequence

aucuacaauggugAUGGGUGAAUUUGUAGAAGGAUgaaagucaaagaauccuucugggaacuaauuuuuggccuucaacaagaauugugaua
(((.(((((..(((.((((.(((((.(((((((((............))))))))).))).......)).)))))))......)))))))).

Structure
-   u     ----gg   U    G  -------   G         gaaag 
 auc acaau      ugA GGGU AA       UUU UAGAAGGAU     u
 ||| |||||      ||| |||| ||       ||| |||||||||      
 uag uguua      acu uccg uu       aag gucuuccua     c
a   -     agaaca   -    g  uuuaauc   g         agaaa 


Annotation confidence Not enough data
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Genome context
chr1: 68200001-68200092 [-]

Database links

Mature ptr-miR-1262

Accession MIMAT0007986
Description Pan troglodytes ptr-miR-1262 mature miRNA
Sequence 14 - AUGGGUGAAUUUGUAGAAGGAU - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70