miRBase entry: ptr-mir-1271

Stem-loop ptr-mir-1271


Accession
MI0008472
Description
Pan troglodytes ptr-mir-1271 precursor miRNA
Gene family
MIPF0000483; mir-1271


Sequence

acccagaucagugCUUGGCACCUAGCAAGCACUCAguaaauacuuguugagugccugcuaugugccaggcauugugcugaggguu
.(((((..(((((((((((((.(((((.(((((((((((....))))))))))).))))).)))))))))))))..))).))...

Structure
--a  -   au             C     A           a 
   cc cag  cagugCUUGGCAC UAGCA GCACUCAguaa u
   || |||  ||||||||||||| ||||| |||||||||||  
   gg guc  guuacggaccgug aucgu cgugaguuguu a
uug  a   gu             u     c           c 


Annotation confidence Not enough data
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Genome context
chr5: 177008904-177008988 [+]

Database links

Mature ptr-miR-1271

Accession MIMAT0007992
Description Pan troglodytes ptr-miR-1271 mature miRNA
Sequence 14 - CUUGGCACCUAGCAAGCACUCA - 35
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70