miRBase entry: ptr-mir-1275

Stem-loop ptr-mir-1275


Accession
MI0008476
Description
Pan troglodytes ptr-mir-1275 precursor miRNA
Gene family
MIPF0000674; mir-1275


Sequence

ccucugugagaaaggguGUGGGGGAGAGGCUGUCuugugucuguaaguaugccaaacuuauuuuccccaaggcagaggg
(((((((...........((((((((((((...((((......))))...))).......)))))))))..))))))).

Structure
-       gagaaaggguG         -------   UGU    ug 
 ccucugu           UGGGGGAGA       GGC   Cuug  u
 |||||||           |||||||||       |||   ||||   
 ggagacg           accccuuuu       ccg   gaau  c
g       ---------ga         auucaaa   uau    gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 34322169-34322247 [-]

Database links

Mature ptr-miR-1275

Accession MIMAT0007996
Description Pan troglodytes ptr-miR-1275 mature miRNA
Sequence 18 - GUGGGGGAGAGGCUGUC - 34
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70