miRBase entry: ptr-mir-1278

Stem-loop ptr-mir-1278


Accession
MI0008478
Description
Pan troglodytes ptr-mir-1278 precursor miRNA
Gene family
MIPF0000591; mir-1278


Sequence

uuugcucauagaugauaugcauaguacucccagaacucauuaaguuggUAGUACUGUGCAUAUCAUCUgugagcgaauag
((((((((((((((((((((((((((((.(((..(((.....)))))).))))))))))))))))))))))))))))...

Structure
---                            c   ga   c 
   uuugcucauagaugauaugcauaguacu cca  acu a
   |||||||||||||||||||||||||||| |||  ||| u
   aagcgagugUCUACUAUACGUGUCAUGA ggu  uga u
gau                            U   --   a 


Annotation confidence Not enough data
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Genome context
chr1: 171853162-171853241 [+]

Database links

Mature ptr-miR-1278

Accession MIMAT0007998
Description Pan troglodytes ptr-miR-1278 mature miRNA
Sequence 49 - UAGUACUGUGCAUAUCAUCU - 68
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70