miRBase entry: ptr-mir-1282-1

Stem-loop ptr-mir-1282-1


Accession
MI0008481
Description
Pan troglodytes ptr-mir-1282-1 precursor miRNA
Gene family
MIPF0000587; mir-1282


Sequence

ccuucuucUCGUUUGCCUUUUUCUGCUUcugcugcaugaucuccgagucccuggggguagagaugauggggcacugggagguaccagagggcaaaaagga
......(((..((((((((((..((((((((((.(((.(((((..(.(((...))).).))))).))).)))....)))))))..))))))))))..)))

Structure
ccuucu   CG          UC       ----   g   g     cg g   c 
      ucU  UUUGCCUUUU  UGCUUcu    gcu cau aucuc  a ucc  
      |||  ||||||||||  |||||||    ||| ||| |||||  | ||| u
      agg  aaacgggaga  auggagg    cgg gua uagag  u ggg  
------   aa          cc       guca   g   g     -a g   g 


Annotation confidence Not enough data
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Genome context
chr15: 24380390-24380489 [-]

Database links

Mature ptr-miR-1282

Accession MIMAT0008001
Description Pan troglodytes ptr-miR-1282 mature miRNA
Sequence 9 - UCGUUUGCCUUUUUCUGCUU - 28
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70