miRBase entry: ptr-mir-128-2

Stem-loop ptr-mir-128-2


Accession
MI0008482
Description
Pan troglodytes ptr-mir-128-2 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

gugcagugggaaggggggccgauacacuguacgagagugaguagcaggucUCACAGUGAACCGGUCUCUUUcccuacuguguc
..((((((((.((((((((((...((((((..((((.(........).))))))))))...)))))))))).))))))))...

Structure
-gu        a          aua      ac    g gag 
   gcaguggg aggggggccg   cacugu  gaga u   u
   |||||||| ||||||||||   ||||||  |||| |    
   ugucaucc UUUCUCUGGC   GUGACA  CUcu g   a
cug        c          CAA      --    g acg 


Annotation confidence Not enough data
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Genome context
chr3: 36484012-36484094 [+]

Database links

Mature ptr-miR-128

Accession MIMAT0002230
Description Pan troglodytes ptr-miR-128 mature miRNA
Sequence 51 - UCACAGUGAACCGGUCUCUUU - 71
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70