miRBase entry: ptr-mir-1282-2

Stem-loop ptr-mir-1282-2


Accession
MI0008483
Description
Pan troglodytes ptr-mir-1282-2 precursor miRNA
Gene family
MIPF0000587; mir-1282


Sequence

ccuucuucUCGUUUGCCUUUUUCUGCUUcugcugcaugaucuccugagucccuggggguagagaugguagggcacuaggagguaucagagggcaaaaagaa
......(((..((((((((((..((((((((((..((.(((((...(.(((...))).).))))).))..)))....)))))))..)))))))))).))).

Structure
ccuucu   CG          UC       ----   gc  g     cug g   c 
      ucU  UUUGCCUUUU  UGCUUcu    gcu  au aucuc   a ucc  
      |||  ||||||||||  |||||||    |||  || |||||   | ||| u
      aga  aaacgggaga  auggagg    cgg  ug uagag   u ggg  
-----a   -a          cu       auca   ga  g     --a g   g 


Annotation confidence Not enough data
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Genome context
chr7: 99179076-99179176 [-]

Database links

Mature ptr-miR-1282

Accession MIMAT0008001
Description Pan troglodytes ptr-miR-1282 mature miRNA
Sequence 9 - UCGUUUGCCUUUUUCUGCUU - 28
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70