miRBase entry: ptr-mir-1288

Stem-loop ptr-mir-1288


Accession
MI0008488
Description
Pan troglodytes ptr-mir-1288 precursor miRNA
Gene family
MIPF0000660; mir-1288


Sequence

aggguguuggucagcagaucaggacugcaacucaccauaguggUGGACUGCCCUGAUCUGGAGAccacugccuu
.(((((.(((((..(((((((((...(((..((((((...))))))..))))))))))))..))))).))))).

Structure
a     u     ag         acu   ac      u 
 gggug ugguc  cagaucagg   gca  ucacca  
 ||||| |||||  |||||||||   |||  |||||| a
 uccgu accAG  GUCUAGUCC   CGU  GGUggu  
u     c     AG         ---   CA      g 


Annotation confidence Not enough data
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Genome context
chr17: 38592206-38592279 [+]

Database links

Mature ptr-miR-1288

Accession MIMAT0008006
Description Pan troglodytes ptr-miR-1288 mature miRNA
Sequence 44 - UGGACUGCCCUGAUCUGGAGA - 64
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70