miRBase entry: ptr-mir-129-1

Stem-loop ptr-mir-129-1


Accession
MI0008493
Description
Pan troglodytes ptr-mir-129-1 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

gauCUUUUUGCGGUCUGGGCUUGCuguuccucucaacaguagucaggaagcccuuaccccaaaaaguaucu
((((((((((.(((..((((((.(((..(..((....))..).))).))))))..))).))))))).))).

Structure
-   -       C   CU      G   uu cu  c 
 gau CUUUUUG GGU  GGGCUU Cug  c  cu a
 ||| ||||||| |||  |||||| |||  |  ||  
 cua gaaaaac cca  cccgaa gac  g  ga a
u   u       c   uu      g   -u au  c 


Annotation confidence Not enough data
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Genome context
chr7: 132758577-132758647 [+]

Database links

Mature ptr-miR-129

Accession MIMAT0008010
Description Pan troglodytes ptr-miR-129 mature miRNA
Sequence 4 - CUUUUUGCGGUCUGGGCUUGC - 24
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70