miRBase entry: ptr-mir-129-2

Stem-loop ptr-mir-129-2


Accession
MI0008494
Description
Pan troglodytes ptr-mir-129-2 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

gcccuucgcgaauCUUUUUGCGGUCUGGGCUUGCuguacauaacucaauagccggaagcccuuaccccaaaaagcauuugcggagggcg
((((((((((((((((((((.(((..(((((((((((..........)))))...))))))..))).))))))).))))))))))))).

Structure
-             -       C   CU      ---     acau 
 gcccuucgcgaau CUUUUUG GGU  GGGCUU   GCugu    a
 ||||||||||||| ||||||| |||  ||||||   |||||     
 cgggaggcguuua gaaaaac cca  cccgaa   cgaua    a
g             c       c   uu      ggc     acuc 


Annotation confidence Not enough data
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Genome context
chr11: 43765047-43765135 [+]

Database links

Mature ptr-miR-129

Accession MIMAT0008010
Description Pan troglodytes ptr-miR-129 mature miRNA
Sequence 14 - CUUUUUGCGGUCUGGGCUUGC - 34
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70