miRBase entry: ptr-mir-1296

Stem-loop ptr-mir-1296


Accession
MI0008499
Description
Pan troglodytes ptr-mir-1296 precursor miRNA
Gene family
MIPF0000649; mir-1296


Sequence

accuaccuaacugggUUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucuguggggaguggggcuucgacccuaacccaggugggcug
.(((((((....(((((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))))))))))))...

Structure
--a       aacu         CCCU       U      ua    a 
   ccuaccu    gggUUAGGG    GGCUCCA CUCCuu  ggaa a
   |||||||    |||||||||    ||||||| ||||||  ||||  
   gggugga    cccaauccc    ucggggu gagggg  ucuu c
guc       ----         agcu       -      ug    c 


Annotation confidence Not enough data
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Genome context
chr10: 64249159-64249249 [-]

Database links

Mature ptr-miR-1296

Accession MIMAT0008015
Description Pan troglodytes ptr-miR-1296 mature miRNA
Sequence 16 - UUAGGGCCCUGGCUCCAUCUCC - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70