miRBase entry: ptr-mir-1302-4

Stem-loop ptr-mir-1302-4


Accession
MI0008519
Description
Pan troglodytes ptr-mir-1302-4 precursor miRNA
Gene family
MIPF0000456; mir-1302

Literature search
1 open access papers mention ptr-mir-1302-4
(2 sentences)

Sequence

ggaugcccaguuaguuugaauuuuagauaaacaacgaauaauuucguagcauaaauaugucccaagcuuaguUUGGGACAUACUUAUGCUAAAaaacauuauugguuguuuaucugagauucaaaauuaagcauuuu
.(((((....(((((((((((((((((((((((((.((((((....((((((((.((((((((((((...)))))))))))).))))))))......)))))).)))))))))))))))))).))))))))))))..

Structure
-g     ccag       -                  g      --uucg        a            u 
  gaugc    uuaguuu gaauuuuagauaaacaac aauaau      uagcauaa uaugucccaagc  
  |||||    ||||||| |||||||||||||||||| ||||||      |||||||| |||||||||||| u
  uuacg    aauuaaa cuuagagucuauuuguug uuauua      AUCGUAUU AUACAGGGUUug  
uu     ----       a                  g      caaaAA        C            a 


Annotation confidence Not enough data
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Genome context
AACZ04046709.1: 653-789 [-]

Database links

Mature ptr-miR-1302

Accession MIMAT0008021
Description Pan troglodytes ptr-miR-1302 mature miRNA
Sequence 73 - UUGGGACAUACUUAUGCUAAA - 93
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70