miRBase entry: ptr-mir-1302-6

Stem-loop ptr-mir-1302-6


Accession
MI0008521
Description
Pan troglodytes ptr-mir-1302-6 precursor miRNA
Gene family
MIPF0000456; mir-1302

Literature search
1 open access papers mention ptr-mir-1302-6
(2 sentences)

Sequence

aacaaauaauuugguaauauauguauggcccacacaauauuuaggacaacaauauUUGGGACAUACUUAUGCUAAAaaaguauuuguug
((((((((.(((..((.((((.(((((.((((...((((((.........)))))))))).))))).)))).))..))).)))))))).

Structure
-        a   gg  a    u     g    cac      uag 
 aacaaaua uuu  ua uaua guaug ccca   aauauu   g
 |||||||| |||  || |||| ||||| ||||   ||||||   a
 uuguuuau aaa  AU GUAU CAUAC GGGU   Uuauaa   c
g        g   AA  C    U     A    ---      caa 


Annotation confidence Not enough data
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Genome context
chr7: 17197808-17197896 [-]

Database links

Mature ptr-miR-1302

Accession MIMAT0008021
Description Pan troglodytes ptr-miR-1302 mature miRNA
Sequence 56 - UUGGGACAUACUUAUGCUAAA - 76
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70