miRBase entry: ptr-mir-1302-8

Stem-loop ptr-mir-1302-8


Accession
MI0008523
Description
Pan troglodytes ptr-mir-1302-8 precursor miRNA
Gene family
MIPF0000456; mir-1302

Literature search
1 open access papers mention ptr-mir-1302-8
(2 sentences)

Sequence

cccauuuaaacuugaauuucauauaaacaccguaauuuucagcauuaguguaucacaugcaguauUUGGGACAUACUUAUGCUAAAaaauuaggugguguugaucugaaauuccaguguagaugggc
((((((((.(((.((((((((.((.((((((((((((((.(((((.(((((.((.((.........)).)).))))).)))))..)))))))..))))))).)).)))))))).))).)))))))).

Structure
-        a   u        u  a       --       -c     u     a  a  ugc 
 cccauuua acu gaauuuca au aacaccg  uaauuuu  agcau agugu uc ca   a
 |||||||| ||| |||||||| || |||||||  |||||||  ||||| ||||| || ||   g
 ggguagau uga cuuaaagu ua uuguggu  auuaaaA  UCGUA UCAUA AG GU   u
c        g   c        c  g       gg       AA     U     C  G  Uua 


Annotation confidence Not enough data
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Genome context
chr9: 75086784-75086910 [-]

Database links

Mature ptr-miR-1302

Accession MIMAT0008021
Description Pan troglodytes ptr-miR-1302 mature miRNA
Sequence 66 - UUGGGACAUACUUAUGCUAAA - 86
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70