miRBase entry: ptr-mir-1306

Stem-loop ptr-mir-1306


Accession
MI0008525
Description
Pan troglodytes ptr-mir-1306 precursor miRNA
Gene family
MIPF0000531; mir-1306


Sequence

ugagcagucuccaccaccuccccugcaaacguccaguggugcagagguaauggACGUUGGCUCUGGUGGUGauggacaguccga
((.((.((((.(((((((......((.((((((((.((.(.....).)).)))))))).))...)))))))..)))).)).)).

Structure
-  a  a    -c       uccccu  a        g  g g 
 ug gc gucu  caccacc      gc aacgucca ug u c
 || || ||||  |||||||      || |||||||| || | a
 gc ug cagg  GUGGUGG      CG UUGCAggu au g g
a  c  a    ua       ---UCU  G        a  g a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr22: 6676461-6676544 [+]

Database links

Mature ptr-miR-1306

Accession MIMAT0008023
Description Pan troglodytes ptr-miR-1306 mature miRNA
Sequence 54 - ACGUUGGCUCUGGUGGUG - 71
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70