miRBase entry: ptr-mir-1323

Stem-loop ptr-mir-1323


Accession
MI0008530
Description
Pan troglodytes ptr-mir-1323 precursor miRNA
Gene family
MIPF0000617; mir-1323


Sequence

cugagguccUCAAAACUGAGGGGCAUUUUCUgugguuugaaaggaaagugcacccaguuuuggggaugucaa
.(((.(((((((((((((.((.(((((((((...........))))))))).))))))))))))))).))).

Structure
c   g             A  G         gugg 
 uga guccUCAAAACUG GG GCAUUUUCU    u
 ||| ||||||||||||| || |||||||||    u
 acu uagggguuuugac cc cgugaaagg    u
a   g             -  a         aaag 


Annotation confidence Not enough data
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Genome context
chr19: 56020103-56020174 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ptr-mir-1323
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-1323

Accession MIMAT0008028
Description Pan troglodytes ptr-miR-1323 mature miRNA
Sequence 10 - UCAAAACUGAGGGGCAUUUUCU - 31
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70