miRBase entry: ptr-mir-1324

Stem-loop ptr-mir-1324


Accession
MI0008531
Description
Pan troglodytes ptr-mir-1324 precursor miRNA
Gene family
MIPF0000589; mir-1324


Sequence

ccugaagaggugcaugaagccugguccugcccucacugggaacccccuucccugcugguaCCAGACAGAAUUCUAUGCACUUUCcuggaggcucc
(((...((((((((((((..(((.((.((((..((..(((((.....)))))))..))))...)))))..))).))))))))).....)))....

Structure
----   --gaa         -   gc   g  --c    cu  cu     c 
    ccu     gaggugcau gaa  cug uc   ugcc  ca  gggaa c
    |||     ||||||||| |||  ||| ||   ||||  ||  ||||| c
    gga     UUUCACGUA CUU  GAC AG   augg  gu  cccuu c
ccuc   ggucC         U   AA   -  ACC    uc  --     c 


Annotation confidence Not enough data
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Genome context
chr10: 135909328-135909422 [+]

Database links

Mature ptr-miR-1324

Accession MIMAT0008029
Description Pan troglodytes ptr-miR-1324 mature miRNA
Sequence 61 - CCAGACAGAAUUCUAUGCACUUUC - 84
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70