miRBase entry: ptr-mir-133a-2

Stem-loop ptr-mir-133a-2


Accession
MI0008533
Description
Pan troglodytes ptr-mir-133a-2 precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

ggaaccaaaugcuuugcuagagcugguaaaauggaaccaaaucgacuguccaauggaUUUGGUCCCCUUCAACCAGCUGuagcugugcauugauggcgccg
((..((((((((...((((.(((((((..((.((.((((((((.(........).)))))))).)).))..))))))).))))...)))))..)))..)).

Structure
-  aa   --     uuu    g       aa  u  a        g cug 
 gg  cca  aaugc   gcua agcuggu  aa gg accaaauc a   u
 ||  |||  |||||   |||| |||||||  || || |||||||| |    
 cc  ggu  uuacg   cgau UCGACCA  UU CC UGGUUUag u   c
g  gc   ag     ugu    G       AC  C  C        g aac 


Annotation confidence Not enough data
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Genome context
chr20: 64673758-64673858 [+]

Database links

Mature ptr-miR-133a

Accession MIMAT0002243
Description Pan troglodytes ptr-miR-133a mature miRNA
Sequence 58 - UUUGGUCCCCUUCAACCAGCUG - 79
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70