Stem-loop ptr-mir-135a-1

Accession

MI0008536

Description

Pan troglodytes ptr-mir-135a-1 precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

aggccucgcuguucucUAUGGCUUUUUAUUCCUAUGUGAuucuacugcucacucauauagggauuggagccguggcgcacggcggggac
...(((((((((.(.((((((((((..((((((((((((.............)))))))))))).)))))))))).).)))))))))..

Structure

agg         u u          UU            uucua 
   ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
   ||||||||| | ||||||||||  ||||||||||||     u
   ggggcggca g ggugccgagg  uagggauauacu     g
-ca         c c          -u            cacuc 

Annotation confidence Not enough data

Genome context

chr3: 53408178-53408266 [-]

Mature ptr-miR-135a

• Accession: MIMAT0002252
• Description: Pan troglodytes ptr-miR-135a mature miRNA
• Sequence: 17 - UAUGGCUUUUUAUUCCUAUGUGA - 39
• Evidence: not_experimental

References

1. PubMed ID: 18760970
   Computational identification of novel microRNA homologs in the chimpanzee genome
   "Baev V, Daskalova E, Minkov I"
   "Comput Biol Chem (2009) 33:62-70