miRBase entry: ptr-mir-135b

Stem-loop ptr-mir-135b


Accession
MI0008537
Description
Pan troglodytes ptr-mir-135b precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

cacucugcuguggccUAUGGCUUUUCAUUCCUAUGUGAuugcugucccaaacucauguagggcuaaaagccaugggcuacagugaggggcgagcuc
..(((((((((((((((((((((((...(((((((((((((......)))..))))))))))..))))))))))))))))))).))))........

Structure
------ca    -                   CAU          --   cu 
        cucu gcuguggccUAUGGCUUUU   UCCUAUGUGA  uug  g
        |||| |||||||||||||||||||   ||||||||||  |||   
        ggga ugacaucggguaccgaaaa   gggauguacu  aac  u
cucgagcg    g                   -uc          ca   cc 


Annotation confidence Not enough data
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Genome context
chr1: 184346362-184346457 [-]

Database links

Mature ptr-miR-135b

Accession MIMAT0008032
Description Pan troglodytes ptr-miR-135b mature miRNA
Sequence 16 - UAUGGCUUUUCAUUCCUAUGUGA - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70