miRBase entry: ptr-mir-139

Stem-loop ptr-mir-139


Accession
MI0008540
Description
Pan troglodytes ptr-mir-139 precursor miRNA
Gene family
MIPF0000117; mir-139


Sequence

guguauucuacagugcacgugucuccaguguggcucggaggcuGGAGACGCGGCCCUGUUGGAGUaa
...((((((((((.((.((((((((((((.(.......).)))))))))))))).))).))))))).

Structure
gug       -   u  a            g gg 
   uauucua cag gc cgugucuccagu u  c
   ||||||| ||| || |||||||||||| |  u
   aUGAGGU GUC CG GCGCAGAGGucg a  c
--a       U   C  -            g gg 


Annotation confidence Not enough data
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Genome context
chr11: 72535754-72535820 [-]

Database links

Mature ptr-miR-139

Accession MIMAT0008035
Description Pan troglodytes ptr-miR-139 mature miRNA
Sequence 44 - GGAGACGCGGCCCUGUUGGAGU - 65
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70