miRBase entry: ptr-mir-142

Stem-loop ptr-mir-142


Accession
MI0008543
Description
Pan troglodytes ptr-mir-142 precursor miRNA
Gene family
MIPF0000084; mir-142


Sequence

gacagugcagucacccauaaaguagaaagcacuacuaacagcacuggagggUGUAGUGUUUCCUACUUUAUGGAugaguguacugu
.((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).))))))))

Structure
g        g   c           a         uaa ag a 
 acagugca uca ccauaaaguag aagcacuac   c  c c
 |||||||| ||| ||||||||||| |||||||||   |  |  
 ugucaugu agu GGUAUUUCAUC UUUGUGAUG   g  g u
-        g   A           C         -Ug ga g 


Annotation confidence Not enough data
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Genome context
chr17: 57615879-57615964 [-]

Database links

Mature ptr-miR-142

Accession MIMAT0008037
Description Pan troglodytes ptr-miR-142 mature miRNA
Sequence 52 - UGUAGUGUUUCCUACUUUAUGGA - 74
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70