miRBase entry: ptr-mir-146a

Stem-loop ptr-mir-146a


Accession
MI0008544
Description
Pan troglodytes ptr-mir-146a precursor miRNA
Gene family
MIPF0000103; mir-146


Sequence

cgauguguauccucagcuuUGAGAACUGAAUUCCAUGGGUUgugucagugucagaccugugaaauucaguucuucagcugggauaucucugucaucgu
(((((.((((((.(((((..((((((((((((.((((((((.((.......)))))))))).)))))))))))).)))))))))))......))))).

Structure
-     -----u      u     uU            C        g  uc 
 cgaug      guaucc cagcu  GAGAACUGAAUU CAUGGGUU ug  a
 |||||      |||||| |||||  |||||||||||| |||||||| ||  g
 gcuac      uauagg gucga  uucuugacuuaa guguccag ac  u
u     ugucuc      -     -c            a        -  ug 


Annotation confidence Not enough data
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Genome context
chr5: 160823646-160823743 [+]

Database links

Mature ptr-miR-146a

Accession MIMAT0008038
Description Pan troglodytes ptr-miR-146a mature miRNA
Sequence 20 - UGAGAACUGAAUUCCAUGGGUU - 41
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70