miRBase entry: ptr-mir-146b

Stem-loop ptr-mir-146b


Accession
MI0008545
Description
Pan troglodytes ptr-mir-146b precursor miRNA
Gene family
MIPF0000103; mir-146


Sequence

cuggcacUGAGAACUGAAUUCCAUAGGCUgugagcucuagcaaugcccuguggacucaguucuggugcccgg
..((((((.((((((((..(((((((((..((........))..).)))))))).))))))))))))))...

Structure
-cu      G        AU        - Ug  agc 
   ggcacU AGAACUGA  UCCAUAGG C  ug   u
   |||||| ||||||||  |||||||| |  ||    
   ccgugg ucuugacu  aggugucc g  ac   c
ggc      -        -c        c ua  gau 


Annotation confidence Not enough data
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Genome context
chr10: 103890510-103890581 [+]

Database links

Mature ptr-miR-146b

Accession MIMAT0008039
Description Pan troglodytes ptr-miR-146b mature miRNA
Sequence 8 - UGAGAACUGAAUUCCAUAGGCU - 29
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70