miRBase entry: ptr-mir-147b

Stem-loop ptr-mir-147b


Accession
MI0008546
Description
Pan troglodytes ptr-mir-147b precursor miRNA
Gene family
MIPF0000105; mir-147


Sequence

auaaaucuaguggaaacauuucugcacaaacuagauucuggacaccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagg
..((((.((((((((.((((((((((((.........((((...)))))))))))))))).)))))))).)))).....

Structure
---au    c        a            aacuagauu    a 
     aaau uaguggaa cauuucugcaca         cugg  
     |||| |||||||| ||||||||||||         |||| c
     uuua AUCGUCUU GUAAAGGCGUGU         Gacc  
ggauu    c        C            ---------    a 


Annotation confidence Not enough data
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Genome context
chr15: 25983943-25984021 [+]

Database links

Mature ptr-miR-147b

Accession MIMAT0008040
Description Pan troglodytes ptr-miR-147b mature miRNA
Sequence 48 - GUGUGCGGAAAUGCUUCUGCUA - 69
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70