miRBase entry: ptr-mir-148a

Stem-loop ptr-mir-148a


Accession
MI0008547
Description
Pan troglodytes ptr-mir-148a precursor miRNA
Gene family
MIPF0000056; mir-148


Sequence

gaggcaaaguucugagacacuccgacucugaguaugauagaagUCAGUGCACUACAGAACUUUGUcu
.(((((((((((((((.((((..(((((((.......))).))))))))..)).)))))))))))))

Structure
g             -  -a    cc    -   ag 
 aggcaaaguucug ag  cacu  gacu cug  u
 ||||||||||||| ||  ||||  |||| |||  a
 ucUGUUUCAAGAC UC  GUGA  CUga gau  u
-             A  AC    --    a   ag 


Annotation confidence Not enough data
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Genome context
chr7: 25118495-25118561 [-]

Database links

Mature ptr-miR-148a

Accession MIMAT0008041
Description Pan troglodytes ptr-miR-148a mature miRNA
Sequence 44 - UCAGUGCACUACAGAACUUUGU - 65
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70