miRBase entry: ptr-mir-150

Stem-loop ptr-mir-150


Accession
MI0008550
Description
Pan troglodytes ptr-mir-150 precursor miRNA
Gene family
MIPF0000197; mir-150


Sequence

cuccccauggcccugUCUCCCAACCCUUGUACCAGUGcugggcucagacccugguacaggccugggggacagggaccugggga
.((((((.((((((((((((((..(((.(((((((.((((....))).).))))))))))..)))))))))))).))))))))

Structure
c      u  -            AC   U       U -   g 
 ucccca gg cccugUCUCCCA  CCU GUACCAG G cug g
 |||||| || ||||||||||||  ||| ||||||| | |||  
 aggggu cc gggacagggggu  gga caugguc c gac c
-      -  a            cc   -       c a   u 


Annotation confidence Not enough data
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Genome context
chr19: 51722189-51722271 [-]

Database links

Mature ptr-miR-150

Accession MIMAT0008044
Description Pan troglodytes ptr-miR-150 mature miRNA
Sequence 16 - UCUCCCAACCCUUGUACCAGUG - 37
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70