miRBase entry: ptr-mir-152

Stem-loop ptr-mir-152


Accession
MI0008552
Description
Pan troglodytes ptr-mir-152 precursor miRNA
Gene family
MIPF0000056; mir-148


Sequence

gucccccccggcccagguucugugauacacuccgacucgggcucuggagcagUCAGUGCAUGACAGAACUUGGgcccggaaggacc
((((..((.((((((((((((((.((.((((..((((...(((....))))))))))).)).)))))))))))))).))..)))).

Structure
-    cc  c              g  a    cc    cgg   c 
 gucc  cc ggcccagguucugu au cacu  gacu   gcu u
 ||||  || |||||||||||||| || ||||  ||||   |||  
 cagg  gg ccgGGUUCAAGACA UA GUGA  CUga   cga g
c    aa  c              G  C    --    ---   g 


Annotation confidence Not enough data
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Genome context
chr17: 9802748-9802833 [+]

Database links

Mature ptr-miR-152

Accession MIMAT0008046
Description Pan troglodytes ptr-miR-152 mature miRNA
Sequence 53 - UCAGUGCAUGACAGAACUUGG - 73
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70