miRBase entry: ptr-mir-1827

Stem-loop ptr-mir-1827


Accession
MI0008560
Description
Pan troglodytes ptr-mir-1827 precursor miRNA
Gene family
MIPF0000646; mir-1827


Sequence

cagcagcacagccuucaggcuaaggcaaugagaagccucugaaaggcUGAGGCAGUCGAUUGAAU
..((.((.((((((((((....((((........))))))).)))))))..)).)).........

Structure
-------ca  a  -a       -   gcua    aau 
         gc gc  cagccuu cag    aggc   g
         || ||  ||||||| |||    ||||    
         UG CG  GUcggaa guc    uccg   a
UAAGUUAGC  A  GA       a   ----    aag 


Annotation confidence Not enough data
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Genome context
chr15: 59039468-59039532 [+]

Database links

Mature ptr-miR-1827

Accession MIMAT0008052
Description Pan troglodytes ptr-miR-1827 mature miRNA
Sequence 48 - UGAGGCAGUCGAUUGAAU - 65
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70