miRBase entry: ptr-mir-190b

Stem-loop ptr-mir-190b


Accession
MI0008563
Description
Pan troglodytes ptr-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

ugcuucugugUGAUAUGUUUGAUAUUGGGUUguuuaauuaggaaccaacuaaaugucaaacauauucuuacagcagca
((((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))))

Structure
    u     -U               G     -   aa 
ugcu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
|||| |||||  ||||||||||||||| ||||| |||   
acga gacau  uuauacaaacuguaa ucaac aag  u
    c     uc               a     c   ga 


Annotation confidence Not enough data
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Genome context
chr1: 132265165-132265242 [-]

Database links

Mature ptr-miR-190b

Accession MIMAT0008055
Description Pan troglodytes ptr-miR-190b mature miRNA
Sequence 11 - UGAUAUGUUUGAUAUUGGGUU - 31
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70