miRBase entry: ptr-mir-191

Stem-loop ptr-mir-191


Accession
MI0008564
Description
Pan troglodytes ptr-mir-191 precursor miRNA
Gene family
MIPF0000194; mir-191

Literature search
2 open access papers mention ptr-mir-191
(17 sentences)

Sequence

cggcuggacagcgggCAACGGAAUCCCAAAAGCAGCUGuugucuccagagcauuccagcugcgcuuggauuucguccccugcucuccugcc
.(((.(((.((((((..(((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))..)))))).))).)))

Structure
c   u   c      CA         C  AA       --u   cu 
 ggc gga agcggg  ACGGAAUCC AA  GCAGCUG   ugu  c
 ||| ||| ||||||  ||||||||| ||  |||||||   |||  c
 ccg ccu ucgucc  ugcuuuagg uu  cgucgac   acg  a
-   u   c      cc         -  cg       cuu   ag 


Annotation confidence Not enough data
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Genome context
chr3: 50084686-50084776 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-191
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-191

Accession MIMAT0008056
Description Pan troglodytes ptr-miR-191 mature miRNA
Sequence 16 - CAACGGAAUCCCAAAAGCAGCUG - 38
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70