miRBase entry: ptr-mir-192

Stem-loop ptr-mir-192


Accession
MI0008565
Description
Pan troglodytes ptr-mir-192 precursor miRNA
Gene family
MIPF0000063; mir-192


Sequence

gccgagaccgagugcacagggcuCUGACCUAUGAAUUGACAGCCagugcucucgucuccccucuggcugccaauuccauaggucacagguauguucgccucaaugccag
.........(((.(((((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).)))..)))))........

Structure
gccgagacc   u  --   g g  C         -     A       ugcucuc 
         gag gc  aca g cu UGACCUAUG AAUUG CAGCCag       g
         ||| ||  ||| | || ||||||||| ||||| |||||||        
         cuc cg  ugu u ga acuggauac uuaac gucgguc       u
-gaccguaa   -  cu   a g  c         c     c       uccccuc 


Annotation confidence Not enough data
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Genome context
chr11: 64925467-64925575 [-]

Database links

Mature ptr-miR-192

Accession MIMAT0008057
Description Pan troglodytes ptr-miR-192 mature miRNA
Sequence 24 - CUGACCUAUGAAUUGACAGCC - 44
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70