miRBase entry: ptr-mir-196b

Stem-loop ptr-mir-196b


Accession
MI0008570
Description
Pan troglodytes ptr-mir-196b precursor miRNA
Gene family
MIPF0000031; mir-196


Sequence

acuggucggugauuUAGGUAGUUUCCUGUUGUUGGGauccaccuuucucucgacagcacgacacugccuucauuacuucaguu
(((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))).

Structure
-     uc      uU       U  C           ucca 
 acugg  ggugau  AGGUAGU UC UGUUGUUGGGa    c
 |||||  ||||||  ||||||| || |||||||||||     
 ugacu  ucauua  uccguca ag acgacagcucu    c
u     --      cu       c  c           cuuu 


Annotation confidence Not enough data
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Genome context
chr7: 26344249-26344331 [-]

Database links

Mature ptr-miR-196b

Accession MIMAT0008061
Description Pan troglodytes ptr-miR-196b mature miRNA
Sequence 15 - UAGGUAGUUUCCUGUUGUUGGG - 36
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70