miRBase entry: ptr-mir-199a-1

Stem-loop ptr-mir-199a-1


Accession
MI0008571
Description
Pan troglodytes ptr-mir-199a-1 precursor miRNA
Gene family
MIPF0000040; mir-199

Literature search
2 open access papers mention ptr-mir-199a-1
(5 sentences)

Sequence

gccaacccaguguucagacuaccuguucaggaggcucucaauguguACAGUAGUCUGCACAUUGGUUAgg
.((...(((((((.((((((((.(((.((.(((...)))..))...))))))))))).)))))))...))

Structure
g  aac       u        c   --u  -g   g 
 cc   ccagugu cagacuac ugu   ca  gag  
 ||   ||||||| |||||||| |||   ||  ||| c
 gg   GGUUACA GUCUGAUG ACA   gu  cuc  
-  AUU       C        -   ugu  aa   u 


Annotation confidence Not enough data
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Genome context
chr19: 11396978-11397047 [-]

Database links

Mature ptr-miR-199a-3p

Accession MIMAT0009192
Description Pan troglodytes ptr-miR-199a-3p mature miRNA
Sequence 47 - ACAGUAGUCUGCACAUUGGUUA - 68
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70