miRBase entry: ptr-mir-200a

Stem-loop ptr-mir-200a


Accession
MI0008573
Description
Pan troglodytes ptr-mir-200a precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

cgggccccugugagcaucuuaccggacagugcuggauuucccagcuugacucUAACACUGUCUGGUAACGAUGUucaaaggugacccgc
(((((.(((.(((((((((((((((((((((((((.....)))))...........)))))))))))).)))))))).))).).)))).

Structure
-    - c   g        -            -----------     a 
 cggg c ccu ugagcauc uuaccggacagu           gcugg u
 |||| | ||| |||||||| ||||||||||||           ||||| u
 gccc g gga acuUGUAG AAUGGUCUGUCA           cgacc u
c    a u   a        C            CAAUcucaguu     c 


Annotation confidence Not enough data
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Genome context
chr1: 355944-356032 [+]

Database links

Mature ptr-miR-200a

Accession MIMAT0008063
Description Pan troglodytes ptr-miR-200a mature miRNA
Sequence 53 - UAACACUGUCUGGUAACGAUGU - 74
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70