miRBase entry: ptr-mir-202

Stem-loop ptr-mir-202


Accession
MI0008574
Description
Pan troglodytes ptr-mir-202 precursor miRNA
Gene family
MIPF0000121; mir-202


Sequence

cuccucagagccgcccgccguuccuuuuuccuaugcauauacuucuuugaggaucuggccuaaAGAGGUAUAGGGCAUGGGAAaacggggcggucggguccuccccagc
.......(((..((((((((((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).))))))).))))).)))......

Structure
cuccuca   cc     -       u           -a           g   au 
       gag  gcccg ccguucc uuuuccuaugc  uauacuucuuu agg  c
       |||  ||||| ||||||| |||||||||||  ||||||||||| |||   
       cuc  ugggc ggcgggg aaAAGGGUACG  AUAUGGAGAaa ucc  u
-cgaccc   -c     u       c           GG           -   gg 


Annotation confidence Not enough data
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Genome context
chr10: 135422705-135422813 [-]

Database links

Mature ptr-miR-202

Accession MIMAT0008064
Description Pan troglodytes ptr-miR-202 mature miRNA
Sequence 64 - AGAGGUAUAGGGCAUGGGAA - 83
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70