miRBase entry: ptr-mir-206

Stem-loop ptr-mir-206


Accession
MI0008576
Description
Pan troglodytes ptr-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

gcuucccgaggccacaugcuucuuuauauccccauauggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGGuuucggcaagug
((((.((((((((((((((((((((((((..(((((.(.(......).)))))).)))))))))))))))))))))))).)))).

Structure
-    c                        cc     u g uu 
 gcuu ccgaggccacaugcuucuuuauau  ccaua g a  a
 |||| ||||||||||||||||||||||||  ||||| | |   
 ugaa ggcuuuGGUGUGUGAAGGAAUGUA  GGUau c u  c
g    c                        -A     - g uu 


Annotation confidence Not enough data
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Genome context
chr6: 52743837-52743921 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-206

Accession MIMAT0008066
Description Pan troglodytes ptr-miR-206 mature miRNA
Sequence 52 - UGGAAUGUAAGGAAGUGUGUGG - 73
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70