miRBase entry: ptr-mir-208a

Stem-loop ptr-mir-208a


Accession
MI0008577
Description
Pan troglodytes ptr-mir-208a precursor miRNA
Gene family
MIPF0000178; mir-208


Sequence

ugacgggcgagcuuuuggcccggguuauaccugaugcucacguAUAAGACGAGCAAAAAGCUUGUugguc
.(((.(((((((((((.((.((..((((((.(((...))).))))))..)).)).))))))))))).)))

Structure
u   g           g  c  gg      c   u 
 gac ggcgagcuuuu gc cg  uuauac uga  
 ||| ||||||||||| || ||  |||||| ||| g
 cug uUGUUCGAAAA CG GC  AAUAug acu  
-   g           A  A  AG      c   c 


Annotation confidence Not enough data
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Genome context
chr14: 7136906-7136975 [-]

Database links

Mature ptr-miR-208a

Accession MIMAT0008067
Description Pan troglodytes ptr-miR-208a mature miRNA
Sequence 44 - AUAAGACGAGCAAAAAGCUUGU - 65
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70