miRBase entry: ptr-mir-208b

Stem-loop ptr-mir-208b


Accession
MI0008578
Description
Pan troglodytes ptr-mir-208b precursor miRNA
Gene family
MIPF0000178; mir-208


Sequence

ccucucagggaagcuuuuugcucgaauuauguuucugauccgaauAUAAGACGAACAAAAGGUUUGUcugagggca
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))..

Structure
-c        g          c   aa        cu 
  cucucagg aagcuuuuug ucg  uuauguuu  g
  |||||||| |||||||||| |||  ||||||||  a
  gggagucU UUUGGAAAAC AGC  AAUAuaag  u
ac        G          A   AG        cc 


Annotation confidence Not enough data
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Genome context
chr14: 7166298-7166373 [-]

Database links

Mature ptr-miR-208b

Accession MIMAT0008068
Description Pan troglodytes ptr-miR-208b mature miRNA
Sequence 46 - AUAAGACGAACAAAAGGUUUGU - 67
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70