miRBase entry: ptr-mir-210

Stem-loop ptr-mir-210


Accession
MI0008580
Description
Pan troglodytes ptr-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210


Sequence

acccggcagucccuccaggcgcagggcagccccugcccaccgcacacugcgcugccccagacccaCUGUGCGUGUGACAGCGGCUGAucugugccugggcagcgcgacc
...((((.((....((((((((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..)))))))))))).)).))...

Structure
acc  -  a  cccu          gg     c   cc   -      c  c -   c 
   cg gc gu    ccaggcgcag  cagcc cug  cac cgcaca ug g cug  
   || || ||    ||||||||||  ||||| |||  ||| |||||| || | ||| c
   gc cg cg    gguccguguc  GUCGG GAC  GUG GCGUGU ac c gac  
cca  g  a  ----          uA     C   -A   U      C  c a   c 


Annotation confidence Not enough data
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Genome context
chr11: 492995-493103 [-]

Database links

Mature ptr-miR-210

Accession MIMAT0008070
Description Pan troglodytes ptr-miR-210 mature miRNA
Sequence 66 - CUGUGCGUGUGACAGCGGCUGA - 87
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70