miRBase entry: ptr-mir-211

Stem-loop ptr-mir-211


Accession
MI0008581
Description
Pan troglodytes ptr-mir-211 precursor miRNA
Gene family
MIPF0000042; mir-204


Sequence

ucaccuggccaugugacuugugggcUUCCCUUUGUCAUCCUUCGCCUagggcucugagcagggcagggacagcaaaggggugcucaguugucacuucccacagcacgga
.....(((....(((((...(((((.(((((((((..(((((.((((...(((...))).)))))))))..))))))))).)))))...)))))...))).........

Structure
----ucacc   ccau     uug     U         CA     C    agg   c 
         ugg    gugac   ugggc UCCCUUUGU  UCCUU GCCU   gcu  
         |||    |||||   ||||| |||||||||  ||||| ||||   ||| u
         acc    cacug   acucg ggggaaacg  aggga cggg   cga  
aggcacgac   -cuu     uug     u         ac     -    --a   g 


Annotation confidence Not enough data
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Genome context
chr15: 11303032-11303140 [-]

Database links

Mature ptr-miR-211

Accession MIMAT0008071
Description Pan troglodytes ptr-miR-211 mature miRNA
Sequence 26 - UUCCCUUUGUCAUCCUUCGCCU - 47
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70