miRBase entry: ptr-mir-216b

Stem-loop ptr-mir-216b


Accession
MI0008582
Description
Pan troglodytes ptr-mir-216b precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

gcagacuggaAAAUCUCUGCAGGCAAAUGUGAugucacugaggaaaucacacacuuacccguagagauucuacagucugac
.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...)))))))..

Structure
-g       gaA         A  C  --A      g  ac 
  cagacug   AAUCUCUGC GG AA   UGUGAu uc  u
  |||||||   ||||||||| || ||   |||||| ||   
  gucugac   uuagagaug cc uu   acacua ag  g
ca       auc         c  a  cac      a  ga 


Annotation confidence Not enough data
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Genome context
chr2A: 57268666-57268746 [-]

Database links

Mature ptr-miR-216b

Accession MIMAT0008072
Description Pan troglodytes ptr-miR-216b mature miRNA
Sequence 11 - AAAUCUCUGCAGGCAAAUGUGA - 32
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70