miRBase entry: ptr-mir-219-2

Stem-loop ptr-mir-219-2


Accession
MI0008585
Description
Pan troglodytes ptr-mir-219-2 precursor miRNA
Gene family
MIPF0000044; mir-219


Sequence

acucaggggcuucgccacUGAUUGUCCAAACGCAAUUCUuguacgagucugcggccaaccgAGAAUUGUGGCUGGACAUCUGUggcugagcuccgg
.....(((((((.(((((.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..)))))))).))))).)))))))..

Structure
acuca       c     U   U     AA           uac a   u 
     ggggcuu gccac GAU GUCCA  CGCAAUUCUug   g guc  
     ||||||| ||||| ||| |||||  |||||||||||   | ||| g
     ccucgag cggUG CUA CAGGU  GUGUUAAGAgc   c cgg  
---gg       u     U   -     CG           caa -   c 


Annotation confidence Not enough data
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Genome context
chr9: 106531883-106531978 [-]

Database links

Mature ptr-miR-219-5p

Accession MIMAT0009193
Description Pan troglodytes ptr-miR-219-5p mature miRNA
Sequence 19 - UGAUUGUCCAAACGCAAUUCU - 39
Evidence not_experimental

Mature ptr-miR-219-2-3p

Accession MIMAT0009194
Description Pan troglodytes ptr-miR-219-2-3p mature miRNA
Sequence 62 - AGAAUUGUGGCUGGACAUCUGU - 83
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70