miRBase entry: ptr-mir-24-1

Stem-loop ptr-mir-24-1


Accession
MI0008588
Description
Pan troglodytes ptr-mir-24-1 precursor miRNA
Gene family
MIPF0000041; mir-24

Literature search
1 open access papers mention ptr-mir-24-1
(15 sentences)

Sequence

uccggugccuacugagcugauaucaguucucauuuuacacacUGGCUCAGUUCAGCAGGAACAGgag
(((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).))).

Structure
-   g  g   a         ua     ucuca 
 ucc gu ccu cugagcuga  ucagu     u
 ||| || ||| |||||||||  |||||     u
 agG CA GGA GACUUGACU  GGUca     u
g   A  A   C         -C     cacau 


Annotation confidence Not enough data
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Genome context
chr9: 72784548-72784614 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-24-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-24

Accession MIMAT0002751
Description Pan troglodytes ptr-miR-24 mature miRNA
Sequence 43 - UGGCUCAGUUCAGCAGGAACAG - 64
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70