miRBase entry: ptr-mir-301a

Stem-loop ptr-mir-301a


Accession
MI0008597
Description
Pan troglodytes ptr-mir-301a precursor miRNA
Gene family
MIPF0000034; mir-130

Literature search
1 open access papers mention ptr-mir-301a
(1 sentences)

Sequence

acugcuaacgaaugcucugacuuuauugcacuacuguacuuuacagcuagCAGUGCAAUAGUAUUGUCAAAGCaucugaaagcag
.(((((..((.(((((.((((.((((((((((.((((........)).)).))))))))))....)))).))))).))..)))))

Structure
a     aa  a     c    ---u          a  -  acu 
 cugcu  cg augcu ugac    uuauugcacu cu gu   u
 |||||  || ||||| ||||    |||||||||| || ||    
 gacga  gu uaCGA ACUG    GAUAACGUGA ga cg   u
-     aa  c     A    UUAU          C  u  aca 


Annotation confidence Not enough data
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Genome context
chr17: 58454719-58454803 [-]

Database links

Mature ptr-miR-301a

Accession MIMAT0008084
Description Pan troglodytes ptr-miR-301a mature miRNA
Sequence 51 - CAGUGCAAUAGUAUUGUCAAAGC - 73
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70