miRBase entry: ptr-mir-302e

Stem-loop ptr-mir-302e


Accession
MI0008603
Description
Pan troglodytes ptr-mir-302e precursor miRNA
Gene family
MIPF0000658; mir-302_2


Sequence

ugggUAAGUGCUUCCAUGCUUcaguuuccuuacugguaagauggauguaguaauagcaccuaccuuauaga
.(((((.((((((((((...(((((......)))))....))))).........))))).)))))......

Structure
-----u     A     ---------     -GCU     uu 
      gggUA GUGCU         UCCAU    Ucagu  c
      ||||| |||||         |||||    |||||   
      uccau cacga         aggua    gguca  c
agauau     c     uaaugaugu     gaau     uu 


Annotation confidence Not enough data
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Genome context
chr11: 7019397-7019467 [+]

Database links

Mature ptr-miR-302e

Accession MIMAT0008090
Description Pan troglodytes ptr-miR-302e mature miRNA
Sequence 5 - UAAGUGCUUCCAUGCUU - 21
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70