miRBase entry: ptr-mir-320c-1

Stem-loop ptr-mir-320c-1


Accession
MI0008610
Description
Pan troglodytes ptr-mir-320c-1 precursor miRNA
Gene family
MIPF0000163; mir-320


Sequence

uugcauuaaaaaugaggccuucucuucccaguucuucccagagucaggAAAAGCUGGGUUGAGAGGGUagaaaaaaaaugauguagg
((((((((........((((((((..(((((((.((((........)))).)))))))..))))))))..........)))))))).

Structure
-        --aaaaugag        uu       c    cag 
 uugcauua          gccuucuc  cccaguu uucc   a
 ||||||||          ||||||||  ||||||| ||||    
 gauguagu          UGGGAGAG  GGGUCGA AAgg   g
g        aaaaaaaaga        UU       A    acu 


Annotation confidence Not enough data
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Genome context
chr18: 18694050-18694136 [+]

Database links

Mature ptr-miR-320c

Accession MIMAT0008095
Description Pan troglodytes ptr-miR-320c mature miRNA
Sequence 49 - AAAAGCUGGGUUGAGAGGGU - 68
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70