miRBase entry: ptr-mir-329-2

Stem-loop ptr-mir-329-2


Accession
MI0008620
Description
Pan troglodytes ptr-mir-329-2 precursor miRNA
Gene family
MIPF0000110; mir-329


Sequence

guaccugaagagagguuuucuggguuucuguuucuuuauugaggaugaAACACACCUGGUUAACCUCUUUuccaguauc
((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..)))).

Structure
-    cu           uu      uuc      u  au 
 guac  gaagagagguu  cugggu   uguuuc uu  u
 ||||  |||||||||||  ||||||   |||||| ||   
 uaug  cuUUUCUCCAA  GGUCCA   ACAAag ag  g
c    ac           UU      --C      u  ga 


Annotation confidence Not enough data
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Genome context
chr14: 86275609-86275687 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from ptr-mir-329-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-329

Accession MIMAT0008101
Description Pan troglodytes ptr-miR-329 mature miRNA
Sequence 49 - AACACACCUGGUUAACCUCUUU - 70
Evidence not_experimental

References

  1. PubMed ID: 18760970
    Computational identification of novel microRNA homologs in the chimpanzee genome
    "Baev V, Daskalova E, Minkov I"
    "Comput Biol Chem (2009) 33:62-70